Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter acrb | APR48_24830 | Not Available | Negative | 5319718 - 5322924 | 115862.0 |
| rnd transporter | APR48_24835 | Not Available | Negative | 5322921 - 5324117 | 41133.0 |
| potassium transport protein kup | APR48_24840 | Not Available | Negative | 5324235 - 5326079 | 66081.2 |
| squalene synthase hpnc | APR48_24845 | Not Available | Positive | 5326210 - 5327136 | 34099.8 |
| squalene synthase hpnd | APR48_24850 | Not Available | Positive | 5327133 - 5327972 | 31449.9 |
| desaturase | APR48_24855 | Not Available | Positive | 5327969 - 5329222 | 43692.3 |
| hypothetical protein | APR48_24860 | Not Available | Positive | 5329219 - 5329524 | 11213.7 |
| lysine transporter lyse | APR48_24865 | Not Available | Negative | 5329521 - 5330165 | 22704.2 |
| nipsnap family containing protein | APR48_24870 | Not Available | Positive | 5330291 - 5330596 | 11849.0 |
| had family hydrolase | APR48_24875 | Not Available | Negative | 5330600 - 5331331 | 26462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
