Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-transferase | APR48_24775 | Not Available | Positive | 5308532 - 5309422 | 30861.2 |
| twin-arginine translocation pathway signal protein | APR48_24780 | Not Available | Negative | 5309444 - 5310439 | 34214.9 |
| hypothetical protein | APR48_24790 | Not Available | Negative | 5311544 - 5312461 | 33759.2 |
| 4-oxalocrotonate tautomerase | APR48_24795 | Not Available | Positive | 5312622 - 5313002 | 14277.2 |
| Trna-gly | Not Available | Not Available | Positive | 5313273 - 5313348 | Not Available |
| dna-binding protein | APR48_24805 | Not Available | Negative | 5313424 - 5315862 | 89241.5 |
| atp-dependent clp protease atp-binding subunit clpx | APR48_24810 | Not Available | Negative | 5315982 - 5317247 | 46248.8 |
| atp-dependent clp protease proteolytic subunit | APR48_24815 | Not Available | Negative | 5317375 - 5317983 | 22232.9 |
| trigger factor | APR48_24820 | Not Available | Negative | 5318100 - 5319419 | 48688.9 |
| Trna-leu | Not Available | Not Available | Positive | 5319446 - 5319532 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
