Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_24725 | Not Available | Positive | 5299590 - 5300156 | 20949.8 |
| lysr family transcriptional regulator | APR48_24730 | Not Available | Negative | 5300259 - 5301122 | 30593.3 |
| alanine racemase | APR48_24735 | Not Available | Positive | 5301258 - 5302409 | 39847.8 |
| hypothetical protein | APR48_24740 | Not Available | Negative | 5302432 - 5302746 | 11456.9 |
| enoyl-coa hydratase | APR48_24745 | Not Available | Negative | 5303114 - 5303941 | 28947.1 |
| tat pathway signal protein | APR48_24750 | Not Available | Positive | 5304038 - 5305909 | 66826.5 |
| hypothetical protein | APR48_24755 | Not Available | Positive | 5305923 - 5306312 | 14237.0 |
| glutathione s-transferase | APR48_24760 | Not Available | Negative | 5306313 - 5306921 | 21993.8 |
| asnc family transcriptional regulator | APR48_24765 | Not Available | Positive | 5307049 - 5307507 | 16408.0 |
| short-chain dehydrogenase | APR48_24770 | Not Available | Negative | 5307517 - 5308419 | 32593.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
