Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | APR48_24675 | Not Available | Positive | 5289047 - 5289580 | 18609.1 |
| carbon monoxide dehydrogenase | APR48_24680 | Not Available | Positive | 5289577 - 5291964 | 85820.2 |
| abc transporter substrate-binding protein | APR48_24685 | Not Available | Positive | 5292039 - 5293283 | 44555.1 |
| abc transporter permease | APR48_24690 | Not Available | Positive | 5293294 - 5294166 | 30557.0 |
| abc transporter permease | APR48_24695 | Not Available | Positive | 5294234 - 5295217 | 34812.3 |
| abc transporter atp-binding protein | APR48_24700 | Not Available | Positive | 5295223 - 5295981 | 27859.6 |
| abc transporter atp-binding protein | APR48_24705 | Not Available | Positive | 5295999 - 5296703 | 25842.9 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | APR48_24710 | Not Available | Negative | 5296721 - 5297575 | 30247.1 |
| metapyrocatechase | APR48_24715 | Not Available | Negative | 5297622 - 5298632 | 36636.3 |
| hypothetical protein | APR48_24720 | Not Available | Positive | 5298761 - 5299465 | 25835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
