Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_24620 | Not Available | Positive | 5278577 - 5279359 | 28157.2 |
| abc transporter substrate-binding protein | APR48_24625 | Not Available | Positive | 5279562 - 5280377 | 28257.7 |
| hypothetical protein | APR48_24630 | Not Available | Positive | 5280495 - 5281286 | 28398.5 |
| aliphatic sulfonate abc transporter substrate-binding protein | APR48_24635 | Not Available | Negative | 5281283 - 5282266 | 34966.2 |
| 4fe-4s ferredoxin | APR48_24640 | Not Available | Negative | 5282266 - 5282595 | 11877.1 |
| pyridine nucleotide-disulfide oxidoreductase | APR48_24645 | Not Available | Negative | 5282592 - 5284223 | 57783.1 |
| hypothetical protein | APR48_24650 | Not Available | Negative | 5284335 - 5285516 | 39979.3 |
| thiosulfate sulfurtransferase | APR48_24655 | Not Available | Negative | 5285623 - 5286573 | 34571.6 |
| tetr family transcriptional regulator | APR48_24660 | Not Available | Negative | 5286694 - 5287413 | 28068.6 |
| molybdopterin dehydrogenase | APR48_24670 | Not Available | Positive | 5288178 - 5289047 | 31154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
