Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein | APR48_24570 | Not Available | Negative | 5268860 - 5270953 | 77231.4 |
| hypothetical protein | APR48_24575 | Not Available | Positive | 5271213 - 5271482 | 9867.86 |
| hypothetical protein | APR48_24580 | Not Available | Negative | 5271517 - 5271804 | 10312.0 |
| biotin biosynthesis protein bioc | APR48_24585 | Not Available | Positive | 5272008 - 5272586 | 19600.8 |
| o-succinylbenzoate--coa ligase | APR48_24590 | Not Available | Positive | 5272586 - 5273992 | 50602.4 |
| acetyl-coa acetyltransferase | APR48_24595 | Not Available | Positive | 5273989 - 5275152 | 38870.0 |
| oxidoreductase | APR48_24600 | Not Available | Negative | 5275163 - 5275882 | 25652.8 |
| hypothetical protein | APR48_24605 | Not Available | Positive | 5276011 - 5276454 | 16116.0 |
| myristoyl transferase | APR48_24610 | Not Available | Positive | 5276590 - 5277705 | 39930.7 |
| abc transporter atp-binding protein | APR48_24615 | Not Available | Positive | 5277717 - 5278529 | 29949.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
