Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_24515 | Not Available | Positive | 5260197 - 5260589 | 14440.3 |
| phosphohistidine phosphatase | APR48_24520 | Not Available | Negative | 5260611 - 5261072 | 17054.5 |
| polyphosphate kinase | APR48_24525 | Not Available | Negative | 5261098 - 5263428 | 86544.8 |
| ornithine-acyl-acp acyltransferase | APR48_24530 | Not Available | Negative | 5263425 - 5264318 | 32408.2 |
| thioredoxin reductase | APR48_24535 | Not Available | Positive | 5264483 - 5266174 | 58382.8 |
| hypothetical protein | APR48_24540 | Not Available | Positive | 5266214 - 5266477 | 9735.49 |
| glutathione s-transferase | APR48_24545 | Not Available | Positive | 5266595 - 5267302 | 26699.1 |
| Trna-pro | Not Available | Not Available | Positive | 5267339 - 5267415 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5267465 - 5267541 | Not Available |
| hypothetical protein | APR48_24560 | Not Available | Positive | 5267850 - 5268095 | 9249.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
