Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | APR48_24465 | Not Available | Positive | 5249298 - 5250644 | 47397.4 |
| histidine kinase | APR48_24470 | Not Available | Negative | 5250675 - 5252018 | 49234.2 |
| two-component system response regulator | APR48_24475 | Not Available | Negative | 5252063 - 5252755 | 25805.2 |
| transcriptional regulator phou | APR48_24480 | Not Available | Negative | 5252794 - 5253495 | 25947.2 |
| phosphate abc transporter atp-binding protein | APR48_24485 | Not Available | Negative | 5253526 - 5254311 | 29077.1 |
| phosphate transporter permease psta | APR48_24490 | Not Available | Negative | 5254365 - 5255228 | 30982.8 |
| phosphate transporter permease subunit pstc | APR48_24495 | Not Available | Negative | 5255246 - 5256271 | 35601.6 |
| phosphate abc transporter substrate-binding protein | APR48_24500 | Not Available | Negative | 5256367 - 5257401 | 36339.1 |
| exopolyphosphatase | APR48_24505 | Not Available | Positive | 5257653 - 5259173 | 55182.1 |
| lysr family transcriptional regulator | APR48_24510 | Not Available | Negative | 5259139 - 5260074 | 33645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
