Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein | APR48_24415 | Not Available | Negative | 5234283 - 5234615 | 11867.6 |
| dna polymerase iii subunit gamma/tau | APR48_24420 | Not Available | Negative | 5234740 - 5236599 | 66229.6 |
| nad(fad)-utilizing dehydrogenase | APR48_24425 | Not Available | Negative | 5236872 - 5238113 | 43070.8 |
| dna helicase uvrd | APR48_24430 | Not Available | Negative | 5238110 - 5241373 | 119012.0 |
| exonuclease | APR48_24435 | Not Available | Negative | 5241370 - 5243955 | 93434.8 |
| thioredoxin | APR48_24440 | Not Available | Positive | 5244113 - 5244445 | 12029.6 |
| transcription termination factor rho | APR48_24445 | Not Available | Positive | 5244634 - 5245899 | 47428.9 |
| oxidoreductase | APR48_24450 | Not Available | Negative | 5245966 - 5247033 | 38378.9 |
| 50s ribosomal protein l31 type b | APR48_24455 | Not Available | Positive | 5247172 - 5247444 | 10038.8 |
| hypothetical protein | APR48_24460 | Not Available | Positive | 5247538 - 5249301 | 64365.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
