Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | APR48_24365 | Not Available | Negative | 5224845 - 5225294 | 16490.7 |
| methyltransferase type 11 | APR48_24370 | Not Available | Negative | 5225334 - 5226098 | 28986.0 |
| hydroxyacylglutathione hydrolase | APR48_24375 | Not Available | Positive | 5226118 - 5226897 | 27883.1 |
| lytic transglycosylase | APR48_24380 | Not Available | Positive | 5226894 - 5228420 | 55670.7 |
| potassium transporter | APR48_24385 | Not Available | Positive | 5228503 - 5230269 | 61846.9 |
| abc transporter permease | APR48_24390 | Not Available | Negative | 5230305 - 5231144 | 30461.8 |
| mannosyltransferase | APR48_24395 | Not Available | Negative | 5231141 - 5231956 | 29807.0 |
| abc transporter substrate-binding protein | APR48_24400 | Not Available | Negative | 5232031 - 5233065 | 36164.7 |
| glutathione metabolism protein | APR48_24405 | Not Available | Negative | 5233226 - 5233618 | 14149.5 |
| recombination protein recr | APR48_24410 | Not Available | Negative | 5233668 - 5234258 | 21210.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
