Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_24310 | Not Available | Positive | 5213357 - 5213947 | 22282.6 |
| aromatic ring hydroxylase | APR48_24315 | Not Available | Positive | 5213950 - 5215725 | 65750.0 |
| hypothetical protein | APR48_24320 | Not Available | Positive | 5215754 - 5216737 | 34602.0 |
| cytosine deaminase | APR48_24325 | Not Available | Negative | 5217064 - 5218485 | 50441.0 |
| hypothetical protein | APR48_24330 | Not Available | Negative | 5218526 - 5219284 | 25280.5 |
| mfs transporter | APR48_24335 | Not Available | Negative | 5219281 - 5220531 | 43930.4 |
| polysaccharide deacetylase | APR48_24340 | Not Available | Negative | 5220610 - 5221488 | 33140.4 |
| fumarylacetoacetate hydrolase | APR48_24345 | Not Available | Negative | 5221514 - 5222218 | 25757.6 |
| arac family transcriptional regulator | APR48_24350 | Not Available | Positive | 5222423 - 5223322 | 33776.3 |
| hypothetical protein | APR48_24360 | Not Available | Negative | 5223751 - 5224746 | 37219.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
