Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_24210 | Not Available | Negative | 5194621 - 5196090 | 53748.9 |
| hypothetical protein | APR48_24215 | Not Available | Negative | 5196083 - 5199313 | 120337.0 |
| gcn5 family acetyltransferase | APR48_24220 | Not Available | Negative | 5199875 - 5200297 | 16206.2 |
| hypothetical protein | APR48_24225 | Not Available | Negative | 5200332 - 5200643 | 11166.7 |
| mfs transporter | APR48_24230 | Not Available | Negative | 5200709 - 5201929 | 42275.3 |
| lysr family transcriptional regulator | APR48_24235 | Not Available | Positive | 5202062 - 5203000 | 34766.9 |
| hypothetical protein | APR48_24240 | Not Available | Negative | 5203062 - 5203472 | 14645.4 |
| hypothetical protein | APR48_24245 | Not Available | Negative | 5203633 - 5204274 | 23797.9 |
| glyoxalase | APR48_24250 | Not Available | Negative | 5204299 - 5204664 | 13203.6 |
| quinone oxidoreductase | APR48_24255 | Not Available | Negative | 5204769 - 5205767 | 35156.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
