Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_24050 | Not Available | Negative | 5162442 - 5162876 | 16530.2 |
| mfs transporter | APR48_24055 | Not Available | Negative | 5162969 - 5164180 | 40922.8 |
| hypothetical protein | APR48_24060 | Not Available | Negative | 5164255 - 5165385 | 39104.3 |
| hypothetical protein | APR48_24065 | Not Available | Negative | 5165511 - 5166722 | 44294.1 |
| hypothetical protein | APR48_24070 | Not Available | Negative | 5166736 - 5167191 | 17049.2 |
| abc transporter permease | APR48_24075 | Not Available | Positive | 5167341 - 5168234 | 31337.8 |
| abc transporter atp-binding protein | APR48_24085 | Not Available | Positive | 5169166 - 5169924 | 26662.5 |
| abc transporter atp-binding protein | APR48_24090 | Not Available | Positive | 5169928 - 5170644 | 25654.6 |
| aldehyde dehydrogenase | APR48_24095 | Not Available | Negative | 5170660 - 5172078 | 49536.3 |
| lysr family transcriptional regulator | APR48_24100 | Not Available | Positive | 5172194 - 5173174 | 35209.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
