Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | APR48_24000 | Not Available | Negative | 5151040 - 5153430 | 86123.3 |
| arac family transcriptional regulator | APR48_24005 | Not Available | Negative | 5153710 - 5154684 | 34704.0 |
| hypothetical protein | APR48_24010 | Not Available | Positive | 5154786 - 5155103 | 11393.6 |
| hypothetical protein | APR48_24015 | Not Available | Positive | 5155100 - 5155525 | 14944.0 |
| isochorismatase | APR48_24020 | Not Available | Negative | 5155557 - 5156192 | 23004.3 |
| hypothetical protein | APR48_24025 | Not Available | Positive | 5156308 - 5157240 | 34191.8 |
| hypothetical protein | APR48_24030 | Not Available | Positive | 5157252 - 5157635 | 14519.5 |
| hypothetical protein | APR48_24035 | Not Available | Positive | 5157696 - 5160623 | 106945.0 |
| abc transporter substrate-binding protein | APR48_24040 | Not Available | Negative | 5160633 - 5161757 | 39677.2 |
| hypothetical protein | APR48_24045 | Not Available | Positive | 5161971 - 5162420 | 15195.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
