Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | APR48_23890 | Not Available | Positive | 5125862 - 5127457 | 57483.7 |
| hypothetical protein | APR48_23895 | Not Available | Negative | 5127509 - 5128141 | 20712.9 |
| type ii secretion system protein gspg | APR48_23900 | Not Available | Positive | 5128192 - 5128632 | 15907.3 |
| type ii secretion system protein gsph | APR48_23905 | Not Available | Positive | 5128607 - 5129086 | 16545.0 |
| type ii secretion system protein gspi | APR48_23910 | Not Available | Positive | 5129083 - 5129475 | 13772.8 |
| general secretion pathway protein j | APR48_23915 | Not Available | Positive | 5129475 - 5130185 | 25587.4 |
| general secretion pathway protein gspk | APR48_23920 | Not Available | Positive | 5130182 - 5131180 | 35579.5 |
| general secretion pathway protein gspl | APR48_23925 | Not Available | Positive | 5131309 - 5132520 | 42654.5 |
| general secretion pathway protein gspm | APR48_23930 | Not Available | Positive | 5132517 - 5132979 | 16463.1 |
| hypothetical protein | APR48_23935 | Not Available | Positive | 5132993 - 5133316 | 11497.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
