Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol dehydrogenase | APR48_23740 | Not Available | Negative | 5091749 - 5092537 | 27526.3 |
| d-arabinitol 4-dehydrogenase | APR48_23745 | Not Available | Negative | 5092534 - 5093916 | 49470.7 |
| abc transporter atp-binding protein | APR48_23750 | Not Available | Negative | 5094008 - 5095048 | 37258.2 |
| sugar abc transporter permease | APR48_23755 | Not Available | Negative | 5095067 - 5095903 | 30468.8 |
| sugar abc transporter permease | APR48_23760 | Not Available | Negative | 5095915 - 5096772 | 31859.2 |
| sugar abc transporter substrate-binding protein | APR48_23765 | Not Available | Negative | 5096836 - 5098146 | 47488.9 |
| lysr family transcriptional regulator | APR48_23770 | Not Available | Negative | 5098322 - 5099221 | 32561.7 |
| abc transporter substrate-binding protein | APR48_23775 | Not Available | Positive | 5099395 - 5100390 | 34429.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR48_23780 | Not Available | Positive | 5100426 - 5101484 | 36882.3 |
| hypothetical protein | APR48_23785 | Not Available | Negative | 5101558 - 5101890 | 12332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
