Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | APR48_23685 | Not Available | Negative | 5082987 - 5083628 | 22713.6 |
| repa replication protein | APR48_23690 | Not Available | Negative | 5083921 - 5084802 | 33076.7 |
| transcriptional regulator | APR48_23695 | Not Available | Negative | 5084823 - 5085155 | 12109.2 |
| hypothetical protein | APR48_23700 | Not Available | Negative | 5085256 - 5086059 | 29319.7 |
| hypothetical protein | APR48_23705 | Not Available | Negative | 5086287 - 5086634 | 12856.2 |
| xre family transcriptional regulator | APR48_23710 | Not Available | Positive | 5086872 - 5087159 | 10509.8 |
| xylulose kinase | APR48_23720 | Not Available | Negative | 5087481 - 5088952 | 51788.1 |
| arac family transcriptional regulator | APR48_23725 | Not Available | Negative | 5088989 - 5089942 | 35980.8 |
| ribokinase | APR48_23730 | Not Available | Negative | 5089990 - 5090940 | 33195.5 |
| transaldolase | APR48_23735 | Not Available | Negative | 5090964 - 5091635 | 23749.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
