Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_23635 | Not Available | Negative | 5069510 - 5071084 | 57393.9 |
| hypothetical protein | APR48_23640 | Not Available | Negative | 5071130 - 5071714 | 21568.6 |
| hypothetical protein | APR48_23645 | Not Available | Negative | 5072662 - 5074308 | 59271.5 |
| hypothetical protein | APR48_23650 | Not Available | Negative | 5074313 - 5076361 | 72595.0 |
| glyoxylate/hydroxypyruvate reductase a | APR48_23655 | Not Available | Negative | 5076482 - 5077420 | 34514.9 |
| d-amino acid oxidase | APR48_23660 | Not Available | Negative | 5077513 - 5078841 | 47509.0 |
| type vi secretion protein | APR48_23665 | Not Available | Negative | 5079320 - 5081278 | 72091.0 |
| peptidase | APR48_23670 | Not Available | Negative | 5081607 - 5082119 | 18284.1 |
| transposase | APR48_23675 | Not Available | Negative | 5082140 - 5082649 | 19023.0 |
| chromosome partitioning protein parb | APR48_23680 | Not Available | Negative | 5082727 - 5082990 | 9666.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
