Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | APR48_23585 | Not Available | Negative | 5055412 - 5056878 | 52240.2 |
| hypothetical protein | APR48_23590 | Not Available | Negative | 5056959 - 5058365 | 50956.1 |
| 2,5-didehydrogluconate reductase | APR48_23595 | Not Available | Negative | 5058374 - 5059222 | 30869.8 |
| hypothetical protein | APR48_23600 | Not Available | Negative | 5059219 - 5060649 | 50398.2 |
| hydantoin utilization protein b | APR48_23605 | Not Available | Negative | 5060677 - 5062692 | 72512.4 |
| hydantoinase | APR48_23610 | Not Available | Negative | 5062689 - 5064779 | 75083.6 |
| hypothetical protein | APR48_23615 | Not Available | Negative | 5064947 - 5065408 | 17378.1 |
| methionine abc transporter atp-binding protein | APR48_23620 | Not Available | Negative | 5066683 - 5067642 | 34960.5 |
| peptide abc transporter permease | APR48_23625 | Not Available | Negative | 5067639 - 5068535 | 31967.7 |
| abc transporter permease | APR48_23630 | Not Available | Negative | 5068532 - 5069506 | 35379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
