Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph--cytochrome reductase | APR48_23515 | Not Available | Negative | 5036386 - 5039604 | 118363.0 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_23520 | Not Available | Positive | 5039971 - 5040939 | 35315.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_23525 | Not Available | Positive | 5041009 - 5041515 | 18526.6 |
| lysr family transcriptional regulator | APR48_23540 | Not Available | Negative | 5043798 - 5044685 | 33007.1 |
| homoserine kinase | APR48_23550 | Not Available | Negative | 5046232 - 5047197 | 35865.8 |
| threonine synthase | APR48_23555 | Not Available | Negative | 5047215 - 5048633 | 52038.2 |
| nad-dependent epimerase | APR48_23560 | Not Available | Negative | 5048633 - 5049595 | 35414.1 |
| 2-amino-3-ketobutyrate coa ligase | APR48_23565 | Not Available | Negative | 5049592 - 5050794 | 43324.7 |
| hypothetical protein | APR48_23575 | Not Available | Negative | 5053363 - 5053968 | 22098.9 |
| alanine dehydrogenase | APR48_23580 | Not Available | Negative | 5054183 - 5055301 | 39066.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
