Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_23465 | Not Available | Negative | 5026095 - 5027480 | 48961.6 |
| two-component system response regulator | APR48_23470 | Not Available | Negative | 5027477 - 5028151 | 24808.4 |
| hypothetical protein | APR48_23475 | Not Available | Positive | 5028324 - 5028710 | 14592.4 |
| prolyl oligopeptidase | APR48_23480 | Not Available | Negative | 5028724 - 5030781 | 75860.2 |
| acyltransferase | APR48_23485 | Not Available | Positive | 5030990 - 5032666 | 59729.4 |
| hypothetical protein | APR48_23490 | Not Available | Positive | 5032800 - 5033357 | 19310.2 |
| poly granule associated family protein | APR48_23495 | Not Available | Positive | 5033432 - 5033920 | 17061.6 |
| tetr family transcriptional regulator | APR48_23500 | Not Available | Positive | 5033947 - 5034582 | 23312.1 |
| alpha/beta hydrolase | APR48_23505 | Not Available | Positive | 5034679 - 5035452 | 27646.1 |
| hypothetical protein | APR48_23510 | Not Available | Negative | 5035471 - 5036235 | 28497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
