Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pili twitching motility protein pilt | APR48_23410 | Not Available | Negative | 5014332 - 5015375 | 38252.3 |
| hypothetical protein | APR48_23415 | Not Available | Positive | 5015427 - 5016128 | 24668.8 |
| arsr family transcriptional regulator | APR48_23420 | Not Available | Negative | 5016139 - 5016606 | 17506.3 |
| integrase | APR48_23425 | Not Available | Positive | 5016718 - 5019693 | 105612.0 |
| hypothetical protein | APR48_23430 | Not Available | Negative | 5019722 - 5020192 | 16400.9 |
| glutamate dehydrogenase | APR48_23435 | Not Available | Positive | 5020483 - 5021757 | 45853.3 |
| fructose transporter | APR48_23440 | Not Available | Positive | 5021794 - 5022447 | 23345.0 |
| hypothetical protein | APR48_23445 | Not Available | Positive | 5022532 - 5023218 | 23976.2 |
| hypothetical protein | APR48_23450 | Not Available | Positive | 5023222 - 5024229 | 34568.4 |
| arginase | APR48_23455 | Not Available | Negative | 5024226 - 5025137 | 32245.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
