Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylmenaquinone methyltransferase | APR48_01535 | Not Available | Positive | 323982 - 326912 | 107144.0 |
| dihydrodipicolinate synthetase | APR48_01540 | Not Available | Positive | 326932 - 327855 | 32675.4 |
| hypothetical protein | APR48_01545 | Not Available | Negative | 327871 - 328719 | 31483.8 |
| sugar abc transporter atp-binding protein | APR48_01550 | Not Available | Positive | 328945 - 330441 | 53293.4 |
| abc transporter permease | APR48_01555 | Not Available | Positive | 330461 - 331546 | 37920.5 |
| sugar abc transporter substrate-binding protein | APR48_01560 | Not Available | Positive | 331609 - 332715 | 38864.1 |
| hypothetical protein | APR48_01565 | Not Available | Positive | 332834 - 334081 | 46499.7 |
| hypothetical protein | APR48_01570 | Not Available | Negative | 334099 - 334965 | 32136.8 |
| hypothetical protein | APR48_01575 | Not Available | Positive | 335094 - 335549 | 16397.7 |
| hypothetical protein | APR48_01580 | Not Available | Negative | 335597 - 337036 | 50610.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
