Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | APR48_23360 | Not Available | Positive | 5003067 - 5003849 | 27341.4 |
| 16s rrna methyltransferase | APR48_23365 | Not Available | Negative | 5003846 - 5004802 | 32911.2 |
| hypothetical protein | APR48_23370 | Not Available | Positive | 5004857 - 5005240 | 13913.7 |
| phosphoheptose isomerase | APR48_23375 | Not Available | Positive | 5005285 - 5005929 | 21973.2 |
| hypothetical protein | APR48_23380 | Not Available | Positive | 5006110 - 5008932 | 98546.3 |
| transporter | APR48_23385 | Not Available | Positive | 5009162 - 5009917 | 26041.2 |
| oxidoreductase | APR48_23390 | Not Available | Negative | 5009990 - 5010898 | 31403.6 |
| merr family transcriptional regulator | APR48_23395 | Not Available | Positive | 5011002 - 5011487 | 17965.7 |
| mfs transporter | APR48_23400 | Not Available | Positive | 5011484 - 5013034 | 55546.2 |
| type iv pili twitching motility protein pilt | APR48_23405 | Not Available | Negative | 5013169 - 5014305 | 41812.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
