Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_23310 | Not Available | Positive | 4991037 - 4992497 | 52036.2 |
| aaa family atpase | APR48_23315 | Not Available | Positive | 4992482 - 4993840 | 48660.9 |
| hypothetical protein | APR48_23320 | Not Available | Positive | 4993988 - 4994719 | 24760.9 |
| mfs transporter | APR48_23325 | Not Available | Positive | 4994737 - 4995944 | 41120.4 |
| dehydrogenase | APR48_23330 | Not Available | Positive | 4995945 - 4998022 | 73307.1 |
| hyalin | APR48_23335 | Not Available | Negative | 4998100 - 4999542 | 50799.7 |
| l-dehydroascorbate transporter large permease subunit | APR48_23340 | Not Available | Negative | 4999542 - 5000822 | 44541.1 |
| c4-dicarboxylate abc transporter permease | APR48_23345 | Not Available | Negative | 5000819 - 5001373 | 20262.2 |
| 3-dehydroquinate dehydratase | APR48_23350 | Not Available | Negative | 5001432 - 5001875 | 16157.5 |
| abc transporter substrate-binding protein | APR48_23355 | Not Available | Negative | 5001902 - 5002909 | 36830.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
