Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit b | APR48_23260 | Not Available | Negative | 4982804 - 4983274 | 17101.5 |
| atp synthase f0f1 subunit c | APR48_23265 | Not Available | Negative | 4983309 - 4983572 | 8863.27 |
| atp synthase subunit a | APR48_23270 | Not Available | Negative | 4983634 - 4984530 | 32461.5 |
| atp synthase subunit i | APR48_23275 | Not Available | Negative | 4984553 - 4985026 | 17043.2 |
| cytochrome c | APR48_23280 | Not Available | Positive | 4985153 - 4986049 | 32862.4 |
| hypothetical protein | APR48_23285 | Not Available | Positive | 4986046 - 4986357 | 11313.4 |
| mbl fold metallo-hydrolase | APR48_23290 | Not Available | Positive | 4986437 - 4987603 | 42106.0 |
| lipoate--protein ligase | APR48_23295 | Not Available | Positive | 4987600 - 4988295 | 25027.9 |
| lipoyl synthase | APR48_23300 | Not Available | Positive | 4988307 - 4989290 | 36683.2 |
| 4-coumarate--coa ligase | APR48_23305 | Not Available | Positive | 4989467 - 4990999 | 54740.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
