Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_23210 | Not Available | Negative | 4972284 - 4973246 | 34684.6 |
| abc transporter permease | APR48_23215 | Not Available | Negative | 4973314 - 4974324 | 34865.5 |
| abc transporter atp-binding protein | APR48_23220 | Not Available | Negative | 4974347 - 4975864 | 54468.2 |
| transcriptional regulator | APR48_23225 | Not Available | Negative | 4975861 - 4977030 | 40736.5 |
| atp synthase f0f1 subunit epsilon | APR48_23230 | Not Available | Negative | 4977283 - 4977702 | 14817.7 |
| atp synthase subunit beta | APR48_23235 | Not Available | Negative | 4977715 - 4979115 | 50280.4 |
| hypothetical protein | APR48_23240 | Not Available | Negative | 4979269 - 4979676 | 12747.1 |
| atp f0f1 synthase subunit gamma | APR48_23245 | Not Available | Negative | 4979765 - 4980640 | 31494.1 |
| atp synthase subunit alpha | APR48_23250 | Not Available | Negative | 4980662 - 4982215 | 55350.5 |
| atp synthase f0f1 subunit delta | APR48_23255 | Not Available | Negative | 4982266 - 4982796 | 18397.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
