Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_23160 | Not Available | Positive | 4961630 - 4962487 | 28973.3 |
| hypothetical protein | APR48_23165 | Not Available | Positive | 4962481 - 4963008 | 19928.0 |
| dead/deah box helicase | APR48_23170 | Not Available | Negative | 4963018 - 4963713 | 25089.3 |
| thioredoxin | APR48_23175 | Not Available | Positive | 4963791 - 4964240 | 16054.3 |
| dna ligase-associated dexh box helicase | APR48_23180 | Not Available | Negative | 4964245 - 4966848 | 94659.2 |
| atp-dependent dna ligase | APR48_23185 | Not Available | Negative | 4966845 - 4968500 | 61239.9 |
| dna ligase-associated dexh box helicase | APR48_23190 | Not Available | Negative | 4968497 - 4969543 | 37602.4 |
| hypothetical protein | APR48_23195 | Not Available | Negative | 4969642 - 4970187 | 19013.3 |
| pa-phosphatase | APR48_23200 | Not Available | Negative | 4970276 - 4970986 | 25455.5 |
| oxidoreductase | APR48_23205 | Not Available | Negative | 4971036 - 4972199 | 41708.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
