Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | APR48_22905 | Not Available | Negative | 4911506 - 4911994 | 17418.7 |
| cyanate permease | APR48_22910 | Not Available | Negative | 4912000 - 4913271 | 43491.1 |
| cytosine deaminase | APR48_22915 | Not Available | Negative | 4913268 - 4914470 | 42821.6 |
| sodium:solute symporter | APR48_22920 | Not Available | Negative | 4914503 - 4915978 | 51800.6 |
| hypothetical protein | APR48_22925 | Not Available | Negative | 4915975 - 4916187 | 7551.37 |
| gntr family transcriptional regulator | APR48_22930 | Not Available | Positive | 4916354 - 4917118 | 27390.6 |
| hypothetical protein | APR48_22935 | Not Available | Positive | 4917182 - 4918123 | 32459.1 |
| urease | APR48_22940 | Not Available | Positive | 4918128 - 4918439 | 11666.0 |
| shikimate kinase | APR48_22945 | Not Available | Negative | 4918436 - 4918984 | 20351.6 |
| hypothetical protein | APR48_22950 | Not Available | Negative | 4919036 - 4920025 | 34018.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
