Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_01485 | Not Available | Positive | 316206 - 316388 | 6485.72 |
| hypothetical protein | APR48_01490 | Not Available | Negative | 316457 - 316852 | 14547.4 |
| arac family transcriptional regulator | APR48_01495 | Not Available | Positive | 316942 - 317736 | 29600.6 |
| marr family transcriptional regulator | APR48_01500 | Not Available | Negative | 317818 - 318378 | 20590.9 |
| glyoxalase | APR48_01505 | Not Available | Positive | 318520 - 318978 | 16563.6 |
| hypothetical protein | APR48_01510 | Not Available | Positive | 319003 - 319689 | 24996.9 |
| 2-oxo-hepta-3-ene-1,7-dioate hydratase | APR48_01515 | Not Available | Positive | 319700 - 320503 | 29165.0 |
| pyoverdin chromophore biosynthetic protein pvcc | APR48_01520 | Not Available | Positive | 320715 - 322256 | 56930.6 |
| hypothetical protein | APR48_01525 | Not Available | Positive | 322258 - 322749 | 17310.6 |
| lysr family transcriptional regulator | APR48_01530 | Not Available | Negative | 322824 - 323762 | 34206.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
