Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_22855 | Not Available | Negative | 4899089 - 4901890 | 99522.9 |
| hypothetical protein | APR48_22860 | Not Available | Positive | 4902085 - 4902678 | 21259.4 |
| hypothetical protein | APR48_22865 | Not Available | Positive | 4902738 - 4903145 | 14586.7 |
| hypothetical protein | APR48_22870 | Not Available | Negative | 4903172 - 4903525 | 12572.0 |
| hypothetical protein | APR48_22875 | Not Available | Negative | 4903564 - 4904715 | 38921.7 |
| lysr family transcriptional regulator | APR48_22880 | Not Available | Positive | 4904891 - 4905862 | 34565.0 |
| 3-oxoacyl-acp reductase | APR48_22885 | Not Available | Positive | 4905988 - 4906749 | 25840.0 |
| 4-oxalocrotonate tautomerase | APR48_22890 | Not Available | Positive | 4906761 - 4907003 | 8775.32 |
| hypothetical protein | APR48_22895 | Not Available | Negative | 4907035 - 4907292 | 8705.31 |
| hypothetical protein | APR48_22900 | Not Available | Negative | 4907420 - 4911223 | 128307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
