Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma regulatory factor | APR48_22800 | Not Available | Positive | 4888614 - 4889018 | 14536.5 |
| histidine kinase | APR48_22805 | Not Available | Positive | 4889009 - 4890046 | 37023.2 |
| histidine kinase | APR48_22815 | Not Available | Positive | 4891002 - 4892984 | 71631.4 |
| oxidoreductase | APR48_22820 | Not Available | Negative | 4892995 - 4894026 | 36908.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR48_22825 | Not Available | Negative | 4894023 - 4895000 | 33196.0 |
| terephthalate 1,2-dioxygenase | APR48_22830 | Not Available | Negative | 4894997 - 4895461 | 17462.9 |
| rieske (2fe-2s) protein | APR48_22835 | Not Available | Negative | 4895486 - 4896739 | 45842.9 |
| receptor | APR48_22840 | Not Available | Negative | 4896747 - 4897733 | 34678.0 |
| iclr family transcriptional regulator | APR48_22845 | Not Available | Positive | 4897815 - 4898618 | 29069.2 |
| hypothetical protein | APR48_22850 | Not Available | Positive | 4898645 - 4899076 | 15728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
