Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | APR48_22750 | Not Available | Negative | 4879592 - 4880572 | 34214.7 |
| hypothetical protein | APR48_22755 | Not Available | Negative | 4880569 - 4881462 | 33480.9 |
| hypothetical protein | APR48_22760 | Not Available | Negative | 4881569 - 4882465 | 33318.0 |
| bugt protein | APR48_22765 | Not Available | Positive | 4882565 - 4883551 | 34236.3 |
| isopropylmalate isomerase | APR48_22770 | Not Available | Positive | 4883596 - 4885020 | 50157.8 |
| 3-isopropylmalate dehydratase | APR48_22775 | Not Available | Positive | 4885054 - 4885671 | 22533.7 |
| 3-isopropylmalate dehydrogenase | APR48_22780 | Not Available | Positive | 4885695 - 4886768 | 37795.0 |
| hypothetical protein | APR48_22785 | Not Available | Negative | 4886794 - 4887015 | 8655.58 |
| polyvinylalcohol dehydrogenase | APR48_22790 | Not Available | Positive | 4887393 - 4888238 | 30434.9 |
| anti-anti-sigma factor | APR48_22795 | Not Available | Positive | 4888250 - 4888624 | 13292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
