Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | APR48_22695 | Not Available | Negative | 4869124 - 4869699 | 20813.0 |
| mandelate racemase | APR48_22705 | Not Available | Positive | 4870773 - 4871939 | 43191.4 |
| hypothetical protein | APR48_22710 | Not Available | Positive | 4872070 - 4872378 | 10965.0 |
| hypothetical protein | APR48_22715 | Not Available | Negative | 4872363 - 4873301 | 34362.4 |
| hypothetical protein | APR48_22720 | Not Available | Positive | 4873416 - 4874222 | 29983.8 |
| ring-hydroxylating oxygenase subunit alpha | APR48_22725 | Not Available | Positive | 4874248 - 4875591 | 50125.0 |
| laci family transcriptional regulator | APR48_22730 | Not Available | Positive | 4875641 - 4876627 | 34118.0 |
| hypothetical protein | APR48_22735 | Not Available | Positive | 4876687 - 4877535 | 30471.5 |
| hypothetical protein | APR48_22740 | Not Available | Positive | 4877532 - 4878488 | 33933.6 |
| hypothetical protein | APR48_22745 | Not Available | Positive | 4878572 - 4879576 | 35445.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
