Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_22645 | Not Available | Negative | 4857336 - 4858049 | 26025.8 |
| hypothetical protein | APR48_22650 | Not Available | Positive | 4858270 - 4859187 | 32923.6 |
| dehydrogenase | APR48_22655 | Not Available | Positive | 4859324 - 4860064 | 25159.2 |
| hypothetical protein | APR48_22660 | Not Available | Negative | 4860120 - 4860659 | 19443.1 |
| tonb-dependent receptor | APR48_22665 | Not Available | Negative | 4860876 - 4863329 | 86994.0 |
| iron dicitrate transport regulator fecr | APR48_22670 | Not Available | Negative | 4863462 - 4864484 | 36907.1 |
| rna polymerase subunit sigma-24 | APR48_22675 | Not Available | Negative | 4864493 - 4865068 | 21798.2 |
| metallophosphatase | APR48_22680 | Not Available | Positive | 4865163 - 4867157 | 68660.4 |
| glutamate dehydrogenase | APR48_22685 | Not Available | Positive | 4867373 - 4868716 | 48024.4 |
| prevent-host-death protein | APR48_22690 | Not Available | Positive | 4868784 - 4869071 | 10702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
