Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_22540 | Not Available | Positive | 4836166 - 4836957 | 28749.4 |
| carnitine dehydratase | APR48_22545 | Not Available | Positive | 4836989 - 4838095 | 39014.1 |
| 3-oxoacyl-acp reductase | APR48_22550 | Not Available | Positive | 4838130 - 4838882 | 25473.6 |
| hypothetical protein | APR48_22555 | Not Available | Positive | 4838906 - 4840432 | 54721.9 |
| acyl dehydratase | APR48_22560 | Not Available | Positive | 4840437 - 4840913 | 17484.3 |
| 1,4-dihydroxy-6-naphthoate synthase | APR48_22565 | Not Available | Negative | 4841532 - 4842314 | 28993.8 |
| acetoacetyl-coa synthetase | APR48_22575 | Not Available | Negative | 4843314 - 4845326 | 74342.9 |
| hypothetical protein | APR48_22580 | Not Available | Positive | 4845516 - 4846361 | 29539.8 |
| carnitinyl-coa dehydratase | APR48_22585 | Not Available | Positive | 4846358 - 4847119 | 27839.9 |
| hypothetical protein | APR48_22590 | Not Available | Positive | 4847172 - 4848563 | 48208.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
