Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase subunit l | APR48_22440 | Not Available | Negative | 4812791 - 4814821 | 71296.1 |
| enoyl-coa hydratase | APR48_22445 | Not Available | Negative | 4814821 - 4815624 | 28817.5 |
| acyl-coa dehydrogenase | APR48_22450 | Not Available | Negative | 4815634 - 4816794 | 42622.0 |
| hypothetical protein | APR48_22455 | Not Available | Negative | 4816826 - 4818022 | 41348.1 |
| methylcrotonoyl-coa carboxylase | APR48_22460 | Not Available | Negative | 4818025 - 4819632 | 58267.3 |
| hypothetical protein | APR48_22465 | Not Available | Negative | 4819629 - 4820786 | 40715.9 |
| pimeloyl-coa dehydrogenase large subunit | APR48_22470 | Not Available | Negative | 4820802 - 4821983 | 43201.6 |
| 3-oxoacyl-acp reductase | APR48_22475 | Not Available | Negative | 4822050 - 4822877 | 28470.3 |
| dehydratase | APR48_22480 | Not Available | Negative | 4822917 - 4823333 | 15058.3 |
| acyl dehydratase | APR48_22485 | Not Available | Negative | 4823354 - 4823797 | 16220.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
