Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_22390 | Not Available | Negative | 4802740 - 4803876 | 39468.8 |
| mfs transporter | APR48_22395 | Not Available | Negative | 4803948 - 4805405 | 50916.7 |
| hypothetical protein | APR48_22400 | Not Available | Positive | 4805474 - 4806676 | 42850.0 |
| phenylacetic acid degradation protein | APR48_22405 | Not Available | Positive | 4806673 - 4807113 | 15681.0 |
| flavodoxin | APR48_22410 | Not Available | Negative | 4807154 - 4807645 | 17257.9 |
| nitroreductase | APR48_22415 | Not Available | Negative | 4807693 - 4808376 | 25509.4 |
| amp-dependent synthetase | APR48_22420 | Not Available | Positive | 4808493 - 4810469 | 71956.4 |
| carbonate dehydratase | APR48_22425 | Not Available | Negative | 4810503 - 4811153 | 23902.7 |
| enoyl-coa hydratase | APR48_22430 | Not Available | Negative | 4811182 - 4811970 | 28867.0 |
| hypothetical protein | APR48_22435 | Not Available | Negative | 4811979 - 4812770 | 28418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
