Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_01425 | Not Available | Positive | 304695 - 305018 | 11978.7 |
| homogentisate 1,2-dioxygenase | APR48_01430 | Not Available | Positive | 305026 - 306216 | 43948.1 |
| hypothetical protein | APR48_01435 | Not Available | Positive | 306213 - 307193 | 34724.2 |
| hypothetical protein | APR48_01440 | Not Available | Positive | 307265 - 308569 | 46390.6 |
| abc transporter substrate-binding protein | APR48_01445 | Not Available | Positive | 308608 - 309573 | 33012.8 |
| abc transporter permease | APR48_01450 | Not Available | Positive | 309592 - 310518 | 31611.7 |
| abc transporter atp-binding protein | APR48_01455 | Not Available | Positive | 310512 - 311306 | 29068.5 |
| hypothetical protein | APR48_01465 | Not Available | Positive | 312604 - 312963 | 12690.4 |
| mfs transporter | APR48_01470 | Not Available | Positive | 312988 - 314292 | 45849.1 |
| hypothetical protein | APR48_01475 | Not Available | Positive | 314318 - 315427 | 40115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
