Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_22340 | Not Available | Positive | 4789603 - 4790121 | 18607.8 |
| dna polymerase iii subunit delta | APR48_22345 | Not Available | Positive | 4790137 - 4791213 | 38792.8 |
| gamma-glutamyl phosphate reductase | APR48_22350 | Not Available | Positive | 4791262 - 4792554 | 45330.8 |
| glutamate--cysteine ligase | APR48_22355 | Not Available | Positive | 4792701 - 4793999 | 47457.3 |
| potassium transporter kup | APR48_22360 | Not Available | Positive | 4794188 - 4796056 | 68033.4 |
| polysaccharide deacetylase | APR48_22365 | Not Available | Negative | 4796130 - 4797053 | 34403.1 |
| hypothetical protein | APR48_22370 | Not Available | Positive | 4797164 - 4798438 | 43220.7 |
| glutathione synthetase | APR48_22375 | Not Available | Positive | 4798438 - 4799394 | 34944.3 |
| tonb-dependent receptor | APR48_22380 | Not Available | Negative | 4799472 - 4801691 | 78086.5 |
| glutamine amidotransferase | APR48_22385 | Not Available | Negative | 4801919 - 4802686 | 29043.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
