Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein mota | APR48_22290 | Not Available | Positive | 4772008 - 4772709 | 24237.6 |
| biopolymer transporter exbd | APR48_22295 | Not Available | Positive | 4772721 - 4773188 | 16118.4 |
| maltodextrin phosphorylase | APR48_22300 | Not Available | Negative | 4773207 - 4775690 | 93036.9 |
| glycogen synthase | APR48_22305 | Not Available | Negative | 4775737 - 4777236 | 53475.1 |
| glucose-1-phosphate adenylyltransferase | APR48_22310 | Not Available | Negative | 4777245 - 4778573 | 48672.3 |
| glycogen debranching protein | APR48_22315 | Not Available | Negative | 4778671 - 4780797 | 76948.4 |
| glycogen branching protein | APR48_22320 | Not Available | Negative | 4781432 - 4783603 | 81038.2 |
| alpha-glucosidase | APR48_22325 | Not Available | Negative | 4783608 - 4785269 | 61196.1 |
| fad-dependent oxidoreductase | APR48_22330 | Not Available | Positive | 4785364 - 4786872 | 53952.1 |
| leucine--trna ligase | APR48_22335 | Not Available | Positive | 4786961 - 4789591 | 97143.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
