Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanophycin synthetase | APR48_22185 | Not Available | Positive | 4748633 - 4750924 | 81586.7 |
| cyanophycin synthetase | APR48_22190 | Not Available | Positive | 4750994 - 4753561 | 90364.4 |
| hypothetical protein | APR48_22195 | Not Available | Positive | 4753768 - 4754166 | 13533.1 |
| hypothetical protein | APR48_22200 | Not Available | Positive | 4754208 - 4754726 | 17777.3 |
| hypothetical protein | APR48_22205 | Not Available | Positive | 4754939 - 4755205 | 10155.1 |
| long-chain fatty acid--coa ligase | APR48_22215 | Not Available | Positive | 4756009 - 4757688 | 60491.3 |
| peptide abc transporter permease | APR48_22220 | Not Available | Positive | 4757739 - 4758743 | 36613.0 |
| peptide transporter | APR48_22225 | Not Available | Positive | 4758748 - 4759656 | 31588.5 |
| peptide abc transporter atp-binding protein | APR48_22230 | Not Available | Positive | 4759674 - 4760711 | 37389.0 |
| peptide abc transporter atp-binding protein | APR48_22235 | Not Available | Positive | 4760726 - 4761745 | 37388.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
