Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter substrate-binding protein | APR48_22135 | Not Available | Negative | 4736627 - 4737658 | 37741.5 |
| phosphohydrolase | APR48_22140 | Not Available | Positive | 4737902 - 4738468 | 20848.9 |
| abc transporter atp-binding protein | APR48_22145 | Not Available | Positive | 4738588 - 4740396 | 67275.6 |
| 7-cyano-7-deazaguanine synthase | APR48_22150 | Not Available | Negative | 4740354 - 4741082 | 26630.8 |
| hypothetical protein | APR48_22155 | Not Available | Positive | 4741242 - 4741652 | 14337.8 |
| alkaline phosphatase | APR48_22160 | Not Available | Positive | 4741814 - 4743283 | 51258.5 |
| alkaline phosphatase | APR48_22165 | Not Available | Positive | 4743327 - 4744847 | 53250.1 |
| hypothetical protein | APR48_22170 | Not Available | Positive | 4744844 - 4745554 | 25718.5 |
| hypothetical protein | APR48_22175 | Not Available | Negative | 4745783 - 4746268 | 17614.1 |
| abc transporter | APR48_22180 | Not Available | Negative | 4746268 - 4748547 | 83412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
