Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_22035 | Not Available | Positive | 4709298 - 4711400 | 71714.6 |
| hypothetical protein | APR48_22040 | Not Available | Positive | 4711455 - 4711646 | 6075.49 |
| phospholipase c, phosphocholine-specific | APR48_22045 | Not Available | Positive | 4711693 - 4713885 | 79953.3 |
| phospholipase c, phosphocholine-specific | APR48_22050 | Not Available | Positive | 4713900 - 4716152 | 82162.0 |
| hypothetical protein | APR48_22055 | Not Available | Positive | 4716389 - 4716577 | 5954.24 |
| phospholipase c, phosphocholine-specific | APR48_22060 | Not Available | Positive | 4716610 - 4718871 | 81724.4 |
| lysr family transcriptional regulator | APR48_22065 | Not Available | Positive | 4718919 - 4719821 | 32137.2 |
| purine permease | APR48_22070 | Not Available | Positive | 4719941 - 4721359 | 48799.9 |
| hydroxydechloroatrazine ethylaminohydrolase | APR48_22075 | Not Available | Positive | 4721361 - 4722785 | 50701.9 |
| lipoxygenase | APR48_22080 | Not Available | Positive | 4722989 - 4725001 | 72030.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
