Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | APR48_21980 | Not Available | Positive | 4696724 - 4697668 | 33282.0 |
| 3-oxoacyl-acp reductase | APR48_21985 | Not Available | Positive | 4697710 - 4698510 | 27184.5 |
| hypothetical protein | APR48_21995 | Not Available | Negative | 4700939 - 4701844 | 32624.9 |
| quinone oxidoreductase | APR48_22000 | Not Available | Positive | 4701951 - 4702934 | 34718.1 |
| hypothetical protein | APR48_22005 | Not Available | Positive | 4703066 - 4703521 | 16668.8 |
| bile acid:sodium symporter | APR48_22010 | Not Available | Positive | 4703593 - 4704612 | 35944.3 |
| type ii secretion system protein gspe | APR48_22015 | Not Available | Positive | 4704793 - 4706184 | 50125.4 |
| type ii secretion system protein gspf | APR48_22020 | Not Available | Positive | 4706200 - 4707438 | 43708.9 |
| hypothetical protein | APR48_22025 | Not Available | Positive | 4707478 - 4708062 | 21288.3 |
| 5'-nucleotidase | APR48_22030 | Not Available | Positive | 4708080 - 4709066 | 35913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
