Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaase | APR48_21930 | Not Available | Positive | 4686076 - 4686936 | 31306.6 |
| hypothetical protein | APR48_21935 | Not Available | Positive | 4687091 - 4687549 | 15720.5 |
| dna-deoxyinosine glycosylase | APR48_21940 | Not Available | Positive | 4687674 - 4688228 | 20130.0 |
| spermidine synthase | APR48_21945 | Not Available | Positive | 4688233 - 4689012 | 29182.0 |
| type ii secretion system protein e | APR48_21950 | Not Available | Positive | 4689017 - 4690807 | 65949.0 |
| hypothetical protein | APR48_21955 | Not Available | Positive | 4690968 - 4691453 | 17068.8 |
| hypothetical protein | APR48_21960 | Not Available | Positive | 4691467 - 4692978 | 52873.2 |
| lysr family transcriptional regulator | APR48_21965 | Not Available | Negative | 4693058 - 4693981 | 33455.0 |
| mfs transporter | APR48_21970 | Not Available | Positive | 4694081 - 4695064 | 34421.6 |
| gamma-glutamyltransferase | APR48_21975 | Not Available | Positive | 4695088 - 4696701 | 57598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
