Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase | APR48_21880 | Not Available | Negative | 4675227 - 4677692 | 89036.4 |
| phenylacetate--coa ligase | APR48_21885 | Not Available | Negative | 4677725 - 4679035 | 48015.5 |
| phenylacetic acid degradation protein | APR48_21890 | Not Available | Negative | 4679066 - 4679506 | 15748.7 |
| enoyl-coa hydratase | APR48_21895 | Not Available | Negative | 4679510 - 4680313 | 27436.3 |
| phenylacetic acid degradation protein paay | APR48_21900 | Not Available | Positive | 4680479 - 4681081 | 21274.9 |
| tetr family transcriptional regulator | APR48_21905 | Not Available | Positive | 4681134 - 4681769 | 23542.2 |
| abc transporter atp-binding protein | APR48_21910 | Not Available | Negative | 4681792 - 4682829 | 37193.5 |
| atpase | APR48_21915 | Not Available | Negative | 4682885 - 4683886 | 37605.2 |
| atpase | APR48_21920 | Not Available | Negative | 4683913 - 4684932 | 37035.0 |
| peptidase s1 | APR48_21925 | Not Available | Negative | 4684976 - 4685962 | 33871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
