Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR48_21830 | Not Available | Negative | 4664270 - 4666330 | 72387.6 |
| abc transporter atp-binding protein | APR48_21835 | Not Available | Negative | 4666472 - 4667215 | 27258.5 |
| hypothetical protein | APR48_21840 | Not Available | Negative | 4667212 - 4669080 | 65905.5 |
| abc transporter permease | APR48_21845 | Not Available | Negative | 4669125 - 4670153 | 36034.2 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_21850 | Not Available | Negative | 4670268 - 4671413 | 40026.4 |
| phenylacetic acid degradation protein | APR48_21855 | Not Available | Negative | 4671459 - 4672553 | 39901.7 |
| phenylacetate-coa oxygenase | APR48_21860 | Not Available | Negative | 4672565 - 4673083 | 18504.1 |
| phenylacetic acid degradation protein | APR48_21865 | Not Available | Negative | 4673095 - 4673874 | 28852.3 |
| phenylacetate-coa oxygenase | APR48_21870 | Not Available | Negative | 4673885 - 4674181 | 11384.5 |
| phenylacetate-coa oxygenase | APR48_21875 | Not Available | Negative | 4674178 - 4675185 | 38033.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
