Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein | APR48_21725 | Not Available | Negative | 4641943 - 4642152 | 7624.26 |
| biotin--acetyl-coa-carboxylase ligase | APR48_21730 | Not Available | Negative | 4642167 - 4642994 | 29180.1 |
| lysine methyltransferase | APR48_21735 | Not Available | Negative | 4642997 - 4643698 | 26031.7 |
| dna topoisomerase iii | APR48_21740 | Not Available | Positive | 4643839 - 4646790 | 108336.0 |
| abc transporter substrate-binding protein | APR48_21745 | Not Available | Positive | 4646794 - 4647780 | 34635.8 |
| hypothetical protein | APR48_21750 | Not Available | Positive | 4647877 - 4648056 | 5724.7 |
| peptidase c26 | APR48_21755 | Not Available | Negative | 4648070 - 4648963 | 33186.7 |
| ap endonuclease | APR48_21760 | Not Available | Positive | 4649070 - 4650125 | 38846.7 |
| catalase | APR48_21765 | Not Available | Negative | 4650135 - 4651223 | 39260.1 |
| gntr family transcriptional regulator | APR48_21770 | Not Available | Negative | 4651337 - 4652818 | 53548.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
