Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase | APR48_21675 | Not Available | Negative | 4633010 - 4633903 | 31102.8 |
| succinyl-coa synthetase subunit beta | APR48_21680 | Not Available | Negative | 4633915 - 4635081 | 41319.0 |
| n-acetyl-gamma-glutamyl-phosphate reductase | APR48_21685 | Not Available | Positive | 4635290 - 4636213 | 33121.3 |
| hypothetical protein | APR48_21690 | Not Available | Negative | 4636265 - 4637017 | 25868.8 |
| polyketide cyclase | APR48_21695 | Not Available | Negative | 4637092 - 4637508 | 15067.9 |
| recombinase recx | APR48_21700 | Not Available | Negative | 4637495 - 4637950 | 16615.9 |
| dna recombination/repair protein reca | APR48_21705 | Not Available | Negative | 4638018 - 4639079 | 37478.3 |
| marr family transcriptional regulator | APR48_21710 | Not Available | Positive | 4639226 - 4639711 | 17624.1 |
| two-component system response regulator | APR48_21715 | Not Available | Positive | 4639785 - 4640456 | 24528.9 |
| histidine kinase | APR48_21720 | Not Available | Positive | 4640494 - 4641933 | 52428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
